Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq51765 102 5e-17 >seq51765 Length=19914 Score = 102 bits (112), Expect = 5e-17 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | |||||||||||| || || || ||||| | || Sbjct 7837 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 7778 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || ||| | || ||| || | ||||||| || || | || ||||| || | Sbjct 7777 ACCCTCCTCTCTGGTACTGAAACCCTGT-TTATCCAGGAACTCACGTGATCCATTAGCAT 7719 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| |||||||| ||||| | ||||||||||| | ||||| || || || || || | Sbjct 7718 CCCAAATCTTTACACCCTTTGCAGAGAGCTCTTTAGCATTTGTAGAACC-CT-ACAAAAC 7661 Query 25952 ACAG 25955 |||| Sbjct 7660 ACAG 7657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 336951093173640