Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq272950 102 1e-17 >seq272950 Length=166 Score = 102 bits (112), Expect = 1e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || ||||| || |||||||| || || Sbjct 164 CTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGCCGCCTGGCTCGGCGCGGC 105 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| |||| || | |||| || |||| || | || ||||| ||||| Sbjct 104 GGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACGCGCGGCGTGCTGAAGGTCTTC 45 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGC 16617 || ||| ||| |||| || || || ||| ||||||||||| Sbjct 44 CTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78372390495240