Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq470410 89.7 5e-13 >seq470410 Length=401 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||| ||||| | ||| || |||||||| |||||| ||||||| || | || || Sbjct 248 TACTCCACTATCTCTGTGCACAGATTGCTGCATTTGATGGTGCCCAAGTTCTGCTGATTG 189 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTC 146799 || | ||||||||| ||| |||||||||||||| || ||||| ||| | || | Sbjct 188 CTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGCGTGCCGGTCTCGGTCTGGGAC 129 Query 146800 TCGACGATG 146808 |||| |||| Sbjct 128 TCGATGATG 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470931950563200