Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq470410 105 6e-18 >seq470410 Length=401 Score = 105 bits (116), Expect = 6e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 123605 CGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAG 123664 ||| ||||| ||||| |||||||||||||||||| ||||||||||||| | ||||||| Sbjct 138 CGAGACCGGCACGCCCTACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAATCAGCA 197 Query 123665 CAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 |||||||| || || ||||| || ||||| ||| | || || | || |||| Sbjct 198 GAACTTGGGCACCATCAAATGCAGCAATCTGTGCACAGAGATAGTGGAGTACA 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447660127252800