Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq55582 111 2e-19 >seq55582 Length=1580 Score = 111 bits (122), Expect = 2e-19 Identities = 118/153 (77%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | ||||||| | || || | |||||| ||||| |||| Sbjct 191 CCTGCTTCCAGCCATAGAAGTGCATGCTGGTGAGCTTCCCGTAGTTGGGCTCGGCGATGT 250 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||| ||||||||||| |||||||||||| ||||| | ||||| ||||| || | Sbjct 251 GGATGTTGAGAGACTGGCTCTGGTCGATGAAA-GCGCCTCTGTCTGCTGCCATCTTCAGG 309 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||| ||||| || ||||||||||| |||||| Sbjct 310 ATGGTTTTCTGGGAGATCTCCCACACTGTCTTG 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787514951260800