Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq396561 86.0 1e-11 >seq396561 Length=139 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015 || || ||||| || | || || | |||||||| |||||||| || || ||||| || Sbjct 1 TGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGC 60 Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 | || || || |||||||| ||||| ||||| || || || ||| || ||||||||| Sbjct 61 CTCTGCTGATCAGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATG 120 Query 195076 GTGTC 195080 ||||| Sbjct 121 GTGTC 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1098554634697560