Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq64391 95.1 2e-14 >seq64391 Length=6152 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| ||||| || || | || || || || || ||||| | | | | ||| | Sbjct 2435 CAGATGATTGATGGAGAGATGTATCCACCAACAGTGAAGGACACTCAGGCAGAGATGATC 2376 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| ||| ||| || || | || | ||| | |||| | ||| ||||||| | Sbjct 2375 TACCCGCCCCACGTACCTGAGCACTTGCAGTTCTCTGTGGGGCAGGAGGTGTTTGGTTTG 2316 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || || || ||| |||| || | || |||||||| || |||||| | || || ||| Sbjct 2315 GTCCCAGGCTTGATGATGTATGCTACAATATGGCTGAGGGAACACAACCGCGTCTGTGAC 2256 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCA 214221 | |||||||| ||||| ||||| ||| | || || ||||||||||| Sbjct 2255 ATCCTGAAACAGGAGCATCCGGAGTGGGATGATGAGCAGCTGTTCCA 2209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716390579923200