Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq51765 109 4e-19 >seq51765 Length=19914 Score = 109 bits (120), Expect = 4e-19 Identities = 122/162 (75%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || |||||||| |||||||| || ||| || ||||| || || ||||| Sbjct 11189 CCTGTGACATGGGCAATCATATATGTGAGCAGTGAGTAGCTGGCAATATTGAAAGGCACT 11130 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC 111894 ||||| ||||||||||| ||||| ||||| || || || || |||| |||| | Sbjct 11129 CCTAGTCCCATATCTCCTGATCTCTGATAGAGTTGGCAAGACAGTTCGCCATTTAG---A 11073 Query 111895 ACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||||| || || ||||| |||| || |||||||| |||||| Sbjct 11072 ACATAGAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCATC 11031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 388273740934840