Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq396561 107 2e-18 >seq396561 Length=139 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 |||||||| | |||| | ||||| ||| ||||||| || || ||||||||||| || | Sbjct 139 AGGTTGAGCCCAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTA 80 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 ||||||| || |||||| | || || |||||||| ||||| || || |||| || |||| Sbjct 79 TTCCTCCTGATCAGCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGCACCC 20 Query 27572 TAGCAGACTATAATGTCCA 27590 | | ||||| || |||| Sbjct 19 TGTCTGACTACAACATCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564830572521600