Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq117214 113 4e-20 >seq117214 Length=5870 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || |||||||||||||| |||||||||||||| | || || || ||||| ||| Sbjct 4918 GTGGTGGAGGAGCTCTTCCGAGACGGGGTAAACTGGGGCAGGATCGTGGCCTTCTTCGAG 4859 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || || ||||| ||||| ||||| || ||||| | | || | ||||||| |||| | Sbjct 4858 TTCGGCGGTGTGATGTGCGTGGAGAGTGTCAACCGGGAGATGTCTCCCCTCGTGGACAGC 4799 Query 3365 ATTGCCGCGTGGATGACAGA 3384 |||||| | |||||||| || Sbjct 4798 ATTGCCACCTGGATGACCGA 4779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410593862175520