Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq64391 154 2e-32 >seq64391 Length=6152 Score = 154 bits (170), Expect = 2e-32 Identities = 213/298 (71%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348 ||||||| | || ||||| || || || ||| | |||| || ||| | | ||| Sbjct 230 GGAACGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATGAGCTTCTGTAAGGAGGCGG 289 Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 | || | ||| | || ||||| | ||| || |||||||| |||||||||||| | |||| Sbjct 290 TATTAATGATTTCAAAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCAGGGG 349 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 ||||||| | || |||| || || || |||||||||||||| || | ||| | ||| Sbjct 350 AGCAGATTGCATTTCCCATCAGTCCCTTCAGGGAGAACGGAGCTCCAATCTCCACCATGG 409 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 | ||||| |||||||| || || ||||| || || | || || | |||| ||||| Sbjct 410 TTTCACCAAAGATGGCACCTGGTCGTGGCTTCTCTACGAGGAGGCCTGGATACAACTCCA 469 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 ||| || | |||||| ||||| | ||||| || || || || ||||||||||| Sbjct 470 TAGCATCAATGTCTCCATAAAGTTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGT 527 Score = 143 bits (158), Expect = 4e-29 Identities = 184/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || | |||||| | ||| || |||||||| ||||| ||| ||| || ||||| Sbjct 2182 TCACCAATCAGGATGAGCCTAGTTGTTTGGAACAGCTGCTCATCATCCCACTCCGGATGC 2241 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || |||||||| | || || || | |||||||||||| ||||| || || || |||||| Sbjct 2242 TCCTGTTTCAGGATGTCACAGACGCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATC 2301 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 || | || || |||| ||||| |||| || || |||| | ||| || || || Sbjct 2302 ATCAAGCCTGGGACCAAACCAAACACCTCCTGCCCCACAGAGAACTGCAAGTGCTCAGGT 2361 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471 || | ||| || |||||||| | |||| ||| || || | || |||||||| || Sbjct 2362 ACGTGGGGCGGGTAGATCATCTCTGCCTGAGTGTCCTTCACTGTTGGTGGATACATCTCT 2421 Query 9472 CCGTCAATCATCTG 9485 || ||||||||||| Sbjct 2422 CCATCAATCATCTG 2435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709988689267200