Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq569220 89.7 5e-13 >seq569220 Length=106 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| | ||||||||| |||| || |||||||| || ||||| | Sbjct 21 CCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCGTCCTCCAGCTGCTTCCCCGCGAAGA 80 Query 41733 TCAGGCGCTGTTGGTCCGCGGG 41754 |||||||||| ||||||| ||| Sbjct 81 TCAGGCGCTGCTGGTCCGGGGG 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457861952016000