Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1781 102 1e-16 >seq1781 Length=149560735 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| |||||| | |||||| || ||||| || |||||||| |||||||| ||| Sbjct 102230706 AGCCCTGTGACGTGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCGATGTTGAAAGGC 102230765 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || ||||| || || || | ||| ||||| ||||| || || || || Sbjct 102230766 ACTCCTAGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTAGA 102230825 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| || ||||| || |||| ||||| Sbjct 102230826 ACATAGAACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCAT 102230866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589903649339000