Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1781 109 4e-19 >seq1781 Length=149560735 Score = 109 bits (120), Expect = 4e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||| || || ||| || ||||| || || ||| || Sbjct 102230879 AGATATTTCTCTGATGGCTTTGCCACCTTGCCATGCTCTTTGCCAGTTCTATGTTCTAAA 102230820 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | |||| |||| || ||| ||||||| | || | ||||||||||| || || ||||| Sbjct 102230819 TGGTGAACTGTCTTGCCAACTGTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTT 102230760 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| || || || ||| ||||||| || || |||||||| || || |||| Sbjct 102230759 CAACATCGCCAGCTATTCGCTGCTCACATACATGATTGCCCACGTCACAG 102230710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399069792833875