Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16]
23,475 sequences; 1,230,258,557 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1781 120 3e-22
seq2929 89.7 5e-13
>seq1781
Length=149560735
Score = 120 bits (132), Expect = 3e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || || || || ||||| ||||||| || | || |
Sbjct 129690759 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCT 129690818
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||| ||||||||||| || |||||||| || || |||||||||||||| |
Sbjct 129690819 TCAGCCAAAATATAGCAGCAAATGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 129690878
Query 14014 C 14014
|
Sbjct 129690879 C 129690879
>seq2929
Length=111302122
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/117 (78%), Gaps = 4/117 (3%)
Strand=Plus/Minus
Query 14125 TCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 14182
||||||||| | ||| ||||||||| ||||| || | || |||||||| || |||||
Sbjct 96933168 TCTCTTTAGAATCCTT--AATGTATGTGTCAATGAGAAGACTGTACATTTCTGAATGTAT 96933111
Query 14183 GTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC 14239
||||||||| || ||||| || ||||| || |||| ||||||| ||| |||||
Sbjct 96933110 GTTTTCCATGGCAATCTGGAAGCCATAGAAACATCGCGCTTCCGTGACTTGCACTTC 96933054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479587229815000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |