Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6387 82.4 7e-11 >seq6387 Length=12762846 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| || | |||||| | || | ||| | | | Sbjct 4540412 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGC 4540471 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || ||||| ||||| || || || || ||||||||| Sbjct 4540472 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAA 4540531 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | ||||| || || ||||||| | | | | ||||| ||| Sbjct 4540532 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 4540591 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || || || || || || | || ||||| ||| | || || || || || Sbjct 4540592 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTCAGGGGTGGTAA 4540641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478521942502000