Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1781 100 7e-16 >seq1781 Length=149560735 Score = 100 bits (110), Expect = 7e-16 Identities = 125/168 (74%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | ||||| ||| || |||||||||| ||||| ||||| Sbjct 102234986 TACAAATGCCAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCCAATGGGTCACG 102234927 Query 111449 TGACTTTCTAGATT--CAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| ||| | || ||||| || || | ||||||||| Sbjct 102234926 TGAGTTCCTGGATAAGCAGG-GGTTTTG-CACCAGAGAAGAGGGGGACTTGGGACCAGTT 102234869 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || |||||| | || ||||| ||||| |||||| ||||||| Sbjct 102234868 TATGGTTTCCAATGGAGGCATTTTGGAGCAGATTACAAAGACATGCAC 102234821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302961585857450