Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16]
23,475 sequences; 1,230,258,557 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2929 89.7 6e-13
>seq2929
Length=111302122
Score = 89.7 bits (98), Expect = 6e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|||||||| || || | ||| |||||||| ||||| | || ||||| ||||| |||
Sbjct 96933151 ATGTATGTGTCAATGAGAAGACTGTACATTTCTGAATGTATGTTTTCCATGGCAATCTGG 96933092
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463
|| || |||||||||| |||||||||| ||||||||||||
Sbjct 96933091 AAGCCATAGAAACATCGCGCTTCCGTGACTTGCACTTCTTGA 96933050
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|||| |||||| |||||||| ||||| |||||| |||||||| || || ||||||||
Sbjct 96934754 CCTCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACT 96934695
Query 93224 GCTGCAAATGCCACAATACGTTC 93246
||||||||||| || | |||||
Sbjct 96934694 GCTGCAAATGCTACTACGCGTTC 96934672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556697396159000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |