Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16]
23,475 sequences; 1,230,258,557 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq6642 87.8 1e-12
>seq6642
Length=9979828
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || || || |||||||| || || | | | ||||||| | ||
Sbjct 6586152 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTG 6586093
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||||| | ||||| | ||| || ||| ||||| ||||||||||| || ||
Sbjct 6586092 CTTGCCAGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTT 6586033
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || || | ||| ||||| || || ||
Sbjct 6586032 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGT 6585973
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
||| || || ||||| || ||||| |||
Sbjct 6585972 CAGGGTCTTCACAAAGATCTGCATGTTT 6585945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357289749590375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |