Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=196202544 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || |||||| |||| || || || || || |||||||| ||||||||| | |||||| Sbjct 194683749 ATCATCGAATCACAGACAGAGACTGGCACACCTTACATGCTGTACAAAGACTCTTGCAAC 194683690 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||||| | ||||||| |||||||| || || ||||| || ||||| ||| | ||||| Sbjct 194683689 AGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGCACAGAAAT 194683631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451870565311000