Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4328 417 1e-111 seq7078 215 7e-51 seq6642 179 5e-40 seq6387 178 2e-39 seq6492 107 3e-18 seq7311 84.2 3e-11 >seq4328 Length=59825302 Score = 417 bits (462), Expect = 1e-111 Identities = 1060/1595 (66%), Gaps = 33/1595 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || |||||| | || || || || || || || ||||| | || ||| Sbjct 52954747 GCCATCGGCATCGATCTGGGCACCACGTATTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 52954688 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || ||||| || ||||| || || || || || ||||| || Sbjct 52954687 GTGGAGATCATTGCCAACGACCAGGGGAACCGCACCACACCCAGCTATGTGGCCTTCACC 52954628 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || || || |||||||| | ||| Sbjct 52954627 GATACAGAGCGCCTCATCGGGGATGCTGCCAAGAACCAAGTGGCAATGAACCCCACCAAC 52954568 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||| || |||||||| || || ||||||| | || | ||| || Sbjct 52954567 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACAGTGCAGTCG 52954508 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | || || || | ||||| ||||| | | | | Sbjct 52954507 GACATGAAGCACTGGCCCTTCCGTGTGGTGAACGAGGGTGGC----AAGCCCAAGGTGCA 52954452 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTGT 195656 || || | | ||||||| ||| | || |||| || || || ||||||||| Sbjct 52954451 GGTGGAGTACAAGGGTGAGATGAAG-ACCTTCTTCCCAGAGGAGATCAGCTCTATGGTGC 52954393 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 | | ||||||||||||| ||| || | | |||| |||| || | |||| ||| Sbjct 52954392 TCACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGAAAAAAGGTACAGAATGCTGTTA 52954333 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || || |||||||||| || || || || ||||| || || || |||| | | Sbjct 52954332 TCACAGTGCCCGCTTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCA 52954273 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | | || || ||| | | ||||||||||| || ||||| ||||| ||||| |||| Sbjct 52954272 TCACTGGCCTTAACGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATTGCCTATG 52954213 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||| ||||| | || | ||| || ||||| | |||||||| | || | Sbjct 52954212 GCTTGGATAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 52954153 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | || | ||||| | ||| || || || || || | | Sbjct 52954152 GGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAATCCA 52954093 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || ||||| || || || ||||| || || || || || | | ||||| Sbjct 52954092 CAGCAGGTGACACCCACCTGGGTGGGGAGGACTTTGACAACCGAATGGTAAACCATTTTG 52954033 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || |||||| || ||| | ||| || ||| |||| ||| | || | | | Sbjct 52954032 TAGAAGAGTTCAAGCGTAAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGTGAGGC 52953973 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTACGGCTCAAACAA 196127 | || | || || ||||| | || || || ||||| |||||| ||| ||| | | Sbjct 52953972 GTCTGCGTACAGCTTGTGAGAGGGCGAAGCGTACTCTGAGCTCTTCCACG---CAAGCCA 52953916 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||||||||| || | ||||| || ||||||||||| || | || || ||||| | Sbjct 52953915 GCATTGAGATTGACTCCCTCTTTGAGGGCATTGACTTCTACACCTCCATCACTCGTGCCC 52953856 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA-TGGAACCTGTTGAACAAGTA 196246 | ||||| || | || ||||| | ||| | || |||| || || || | | Sbjct 52953855 GCTTTGAGGAACTCAATGCTGATCT-TTTCCGTGGTACCCTGGAGCCAGTGGAGAAGGCC 52953797 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||| | |||||| || | | || ||||| |||||||| || || Sbjct 52953796 CTGCGTGATGCCAAGCTTGATAAGGGCCAGATCCAGGAGATTGTGCTTGTGGGGGGCTCC 52953737 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTT-CTTCAATAATAAAGATTTAAA 196365 || |||||||| ||||| || || |||| | || || ||||||| ||||| | || Sbjct 52953736 ACTCGTATTCCTAAGATCCAGAAGTTGCTG-CAAGATTTCTTCAATGGCAAAGAGCTGAA 52953678 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 ||| | ||||| || |||||||| |||||||||||||| || || || || ||||| || Sbjct 52953677 CAAGAGCATCAATCCAGATGAAGCTGTTGCTTATGGTGCCGCTGTGCAAGCAGCTATCCT 52953618 Query 196426 CTCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 | || | |||| | | || || |||||||| || || | ||||| | ||| | Sbjct 52953617 CATGGGAG---ACAAGTCTGAAAATGTGCAAGATCTGCTCCTGTTGGATGTCACCCCCCT 52953561 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 |||||||| | || ||||| ||||| || |||||| | || | | ||||| || Sbjct 52953560 GTCCCTGGGCATCGAGACAGCTGGTGGAGTGATGACTGCTCTCATCAAGCGTAACACCAC 52953501 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTC 196601 ||||| || || | ||| ||| | || || || || || || | ||| ||| | Sbjct 52953500 CATTCCCACCAAACAAACACAGACCTTCACCACCTACTCAGACAACCAGAGCAG-TGTCC 52953442 Query 196602 ATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACT 196660 | || ||||||||||||||||| | | || | ||||| ||| | | || || | Sbjct 52953441 TCGTCCAGGTATATGAAGGAGAACG-TGCTATGACTAAGGACAACAACTTGCTGGGCAAG 52953383 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 || || | || || || || | |||||| | || ||||| ||||| | || || Sbjct 52953382 TTTGACCTAACAGGCATCCCCCCAGCACCCCGTGGAGTTCCTCAGATCGAGGTCACTTTT 52953323 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 || ||||| || ||||| || || ||||||| |||| ||||||| | | || || Sbjct 52953322 GACATAGATGCTAATGGTATCCTGAACGTCAGTGCTGTGGACAAGAGTACAGGGAAGGAG 52953263 Query 196781 GAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATG 196840 | ||||| || |||||||||||||| || ||| || || || ||||| |||||| Sbjct 52953262 AACAAGATAACCATCACCAATGACAAGGGTCGCCTTAGCAAAGATGATATTGACCGTATG 52953203 Query 196841 GTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 || ||||| || || || |||| | ||| || || Sbjct 52953202 GTACAAGAAGCAGAGAAATACAAAGCAGAGGATGA 52953168 Score = 181 bits (200), Expect = 1e-40 Identities = 262/368 (71%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 195620 AAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCG 195679 ||||| |||||||| ||||||||||| | ||||| ||| |||||||| || ||||| Sbjct 15970299 AAACA-TTTGCTCCTGAAGAAATTTCTGCCATGGTCCTGACAAAGATGAAAGAAACTGCA 15970357 Query 195680 GAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGT 195739 || ||| |||| || | || | |||| ||||| ||||| || || ||||||| | Sbjct 15970358 GAGGCTTATCTGGGCAAGAAAGTTACTCATGCTGTTGTTACTGTGCCAGCCTACTTCAAT 15970417 Query 195740 GATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGA 195799 ||| | || || ||||| ||||| || |||| | | ||||| || | ||| | | Sbjct 15970418 GATGCTCAGCGTCAGGCCACAAAAGATGCTGGTACCATTGCTGGGTTGAACGTGATGCGC 15970477 Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAA 195859 ||||| ||||| ||||| || ||||||||||| || || ||||||||| ||| ||| Sbjct 15970478 ATTATTAATGAGCCAACTGCTGCTGCAATTGCATACGGATTGGACAAGAGAGAGGGTGAA 15970537 Query 195860 GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAAT 195919 || || | | | ||||| || |||||||| || ||||||||||| || || | Sbjct 15970538 ---AAGAACATCCTTGTATTTGACCTGGGTGGTGGAACTTTTGATGTCTCCCTCCTGACA 15970594 Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 ||||| || | || ||||| |||||| |||||| || || || ||||| ||| Sbjct 15970595 ATTGACAACGGAGTCTTTGAAGTTGTGGCTACAAATGGTGACACACACCTGGGTGGAGAA 15970654 Query 195980 GATTTCGA 195987 || || || Sbjct 15970655 GACTTTGA 15970662 >seq7078 Length=6280547 Score = 215 bits (238), Expect = 7e-51 Identities = 368/531 (69%), Gaps = 2/531 (0%) Strand=Plus/Plus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 || ||||| || || ||||| || |||||||| ||| |||| | |||||||| ||| || Sbjct 3075467 ATTTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATTGAAGATGGCATC 3075526 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 || || || || | ||||| ||||| |||||| | ||||| |||||||| || || Sbjct 3075527 TTTGAGGTGAAATCCACTGCAGGTGACACTCATTTGGGTGGAGAAGATTTTGACAACCGC 3075586 Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054 | || || || || ||| ||| || ||| | |||||||| || || || Sbjct 3075587 ATGGTCAACCACTTCATTGCTGAATTCAAGCGCAAGCACAAGAAAGACATCAGTGAGAAC 3075646 Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114 || || ||||||| ||| | ||||||||||||||||| || || || || || || Sbjct 3075647 AAGAGAGCAGTTCGTCGCCTTCGTACTGCATGTGAACGTGCAAAGCGTACCCTGTCATCA 3075706 Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174 | | ||| | | |||| || ||||| | | ||| || ||||||||||| ||| | Sbjct 3075707 AGCACACAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGTATTGACTTCTACACATCG 3075766 Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 || ||| | || || || |||||| | || |||| |||| | |||| ||| Sbjct 3075767 ATCACCAGAGCTCGCTTCGAAGAGCTGAATGCTGACCTGTTCCGTGGCACCCTGGATCCT 3075826 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || || | | || || || || ||| | || ||||| || | |||| ||||| || Sbjct 3075827 GTGGAGAAGGCCCTGCGGGATGCCAAGCTAGACAAGTCACAGATCCATGACATTGTGCTG 3075886 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAA 196353 || || || || ||||| || || |||||||| | |||| | || ||||||||| Sbjct 3075887 GTTGGGGGGTCTACCCGCATCCCAAAGATTCAGAAACTGCTG-CAAGACTTCTTCAACGG 3075945 Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 ||||| || ||||| | ||||| || |||||||| || ||||||||||| Sbjct 3075946 CAAAGAGTTGAACAAGAGCATCAATCCTGATGAAGCTGTGGCTTATGGTGC 3075996 Score = 102 bits (112), Expect = 1e-16 Identities = 110/143 (77%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || |||||||| || || || | || || || |||||||| ||||| || | Sbjct 3075196 ATGCTGTAGTCACTGTACCAGCCTATTTTAACGACTCCCAGCGACAGGCCACAAAAGATG 3075255 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || ||| || ||||||||||||| |||||||| ||||| Sbjct 3075256 CTGGAACCATTGCAGGGCTCAA-TGTACTGCGAATTATCAATGAGCCAACAGCTGCTGCT 3075314 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || || |||||||| ||||| Sbjct 3075315 ATAGCCTACGGTCTGGATAAGAA 3075337 Score = 95.1 bits (104), Expect = 2e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 ||||||||||||||||| | | || | ||||| ||| | | || || | || || | Sbjct 3076830 GTATATGAAGGAGAACG-TGCTATGACTAAGGACAACAACTTGCTGGGCAAGTTTGAGCT 3076888 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 ||| || ||||| |||| ||||||||||| || |||||| | || ||||||||| || Sbjct 3076889 GACCGGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTCGATATTGA 3076948 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 || ||||| || || || || | |||| ||| ||| ||||||| | ||||| Sbjct 3076949 TGCCAATGGCATCCTGAATGTGTCTGCTGTGGATAAGAGCACTGGCAAGGAGAACAAGAT 3077008 Query 196789 TGTGATTACCAATGACAAGGG 196809 ||| || |||||||| || Sbjct 3077009 CACGATAACAAATGACAAAGG 3077029 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||| ||||||||||| | ||||| || || || ||||||||||| | ||| ||| Sbjct 3074241 AGCTGTTGGTATCGATCTTGGAACCACCTATTCCTGTGTTGGTGTGTTCCAACATGGGAA 3074300 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 || || || || | |||||||| || ||| | || || ||| ||||| || || || Sbjct 3074301 GGTGGAAATCATTGCCAATGACCAGGGTAACAGGACCACGCCAAGCTACGTCGCTTTCAC 3074360 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||||| || | | |||| ||||| || || || || || ||||| || | ||| Sbjct 3074361 AGATACAGAGAGGTTGATTGGCGATGCTGCCAAGAACCAAGTTGCAATGAATCCCACCAA 3074420 Query 195478 TACTGTCTT 195486 || ||||| Sbjct 3074421 CACAGTCTT 3074429 >seq6642 Length=9979828 Score = 179 bits (198), Expect = 5e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||||||||||||| | Sbjct 6585949 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 6586008 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| ||||| |||||||||||||| ||||||||| Sbjct 6586009 GACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 6586068 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 6586069 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 6586128 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 6586129 ATCCAGAAGGAGTCCACCCTGCATCTGGTGCT 6586160 Score = 176 bits (194), Expect = 6e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||||||||||||||| | Sbjct 6586177 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAACCCAGT 6586236 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || ||||| ||||||||||| || |||||| Sbjct 6586237 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 6586296 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || ||||||||||| ||||| |||||||| || ||||| |||| |||||| Sbjct 6586297 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 6586356 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 6586357 ATCCAGAAGGAGTCCACCCTGCATCTGGTGCT 6586388 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||||||||||||| | Sbjct 6586633 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 6586692 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || || ||||||||||| || |||||| Sbjct 6586693 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCTGATCAG 6586752 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 6586753 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 6586812 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || || || || | || ||||||| Sbjct 6586813 ATCCAGAAGGAGTCCACCCTGCATCTGGTGCTGCGCCTCAGGGGTGG 6586859 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||| | ||||| || || |||||||||||||||||| | Sbjct 6586405 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 6586464 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||||||| || || | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 6586465 GACACAATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 6586524 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 6586525 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 6586584 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || ||||| || || || || || || Sbjct 6586585 ATCCAGAAAGAGTCCACCCTGCATCTGGTGCT 6586616 >seq6387 Length=12762846 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||| | ||||| || || |||||||| ||||| || | Sbjct 4540412 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGC 4540471 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| || || ||||| |||||||| |||||||| Sbjct 4540472 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAA 4540531 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| |||| |||||| Sbjct 4540532 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 4540591 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | || |||||||| Sbjct 4540592 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTCAGGGGTGGT 4540639 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||| | ||||| || | Sbjct 4539956 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAACCCAGT 4540015 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| |||||||| || || ||||| |||||||| ||||||||| Sbjct 4540016 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 4540075 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| ||||| || || ||||| | || |||||| Sbjct 4540076 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 4540135 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| ||||| || ||||| || | || ||||||| Sbjct 4540136 ATCCAGAAGGAGTCCACTCTCCATCTTGTCCTGCGCCTCAGGGGTGG 4540182 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||| | || || || || |||||||| ||||| ||| | Sbjct 4540184 ATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 4540243 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| || || ||||| |||||||| ||||||||| Sbjct 4540244 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 4540303 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || || || | || |||||| Sbjct 4540304 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCCGACTACAAC 4540363 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 4540364 ATCCAGAAGGAGTCCACCCTGCATCTGGTGCT 4540395 >seq6492 Length=10956400 Score = 107 bits (118), Expect = 3e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 196618 AGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 ||| ||||| ||| | ||||| || ||||| || |||||||| ||| |||| || || Sbjct 10077843 AGGTGAACGTCCCCTCACCAAGGACAATCATCTTCTGGGAACTTTTGATCTGACTGGAAT 10077784 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || |||| || | ||||| ||||||||| | ||| ||| || ||||| | ||||| Sbjct 10077783 CCCTCCTGCTCCTCGTGGTGTCCCACAGATTGAAGTTACCTTTGAAATAGATGTGAATGG 10077724 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 ||| || ||||||||||| ||||| | |||| || | ||||| ||||| Sbjct 10077723 AATCCTTCGTGTCACAGCTGAAGACAAAGGCACTGGGAACAAAAACAAGATCACAATTAC 10077664 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAA 196857 ||||| || ||||| | ||||| ||||| | |||||| | ||||| || || Sbjct 10077663 AAATGATCAGAATCGGCTAACACCAGAGGAGATTGAGAGGATGGTTAATGATGCTGAGAA 10077604 Query 196858 GT 196859 || Sbjct 10077603 GT 10077602 >seq7311 Length=4974273 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || ||||| |||||| | ||||| ||| | Sbjct 3901310 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAAACCATCACCTTGGAGGTGGAGCCCAAT 3901251 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| | || |||||||| || || |||||||| Sbjct 3901250 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGG 3901207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657669358502000