Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16]
23,475 sequences; 1,230,258,557 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4328 288 3e-72
seq7078 203 1e-46
seq6642 158 4e-33
seq6387 116 1e-20
seq6492 113 1e-19
seq2929 84.2 7e-11
>seq4328
Length=59825302
Score = 288 bits (318), Expect = 3e-72
Identities = 552/806 (68%), Gaps = 12/806 (1%)
Strand=Plus/Plus
Query 349515 AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAA 349574
|||||||||| || | || ||||||||||| | ||||| | || ||||| ||||
Sbjct 15970294 AACAAAAACATTTGCT-CCTGAAGAAATTTCTGCCATGGTCCTGACAAAGATGAAAGAAA 15970352
Query 349575 TTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATT 349634
||| || || ||| | || | | ||| ||| |||||||| ||||||| |||||||| |
Sbjct 15970353 CTGCAGAGGCTTATCTGGGCAAGAAAGTTACTCATGCTGTTGTTACTGTGCCAGCCTACT 15970412
Query 349635 TTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTC 349694
| |||||||| |||||| || |||||||||||||| | |||||| ||||| || ||
Sbjct 15970413 TCAATGATGCTCAGCGTCAGGCCACAAAAGATGCTGGTACCATTGCTGGGTTGAACGTGA 15970472
Query 349695 TAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTG 349754
| | || |||||||| || |||||||| ||||||||||| || | || || ||| |
Sbjct 15970473 TGCGCATTATTAATGAGCCAACTGCTGCTGCAATTGCATACGGATTGGACAA---GAGAG 15970529
Query 349755 ACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTAC 349814
| ||||| || || ||| | ||||| | |||||||| ||||||||||| || || |
Sbjct 15970530 AGGGTGAAAAGAACATCCTTGTATTTGACCTGGGTGGTGGAACTTTTGATGTCTCCCTCC 15970589
Query 349815 TAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTG 349874
| ||| |||| | ||| | ||||||||| || || |||||| ||||| || ||||
Sbjct 15970590 TGACAATTGACAACGGAGTCTTTGAAGTTGTGGCTACAAATGGTGACACACACCTGGGTG 15970649
Query 349875 GAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTA 349934
||||||| ||||| | ||| | | ||| || | ||| | ||| || |
Sbjct 15970650 GAGAAGACTTTGACCAGCGTGTTATGGAGCACTTCATCAAACTCTACAAGAAGAAAACAG 15970709
Query 349935 AAATTGATAT-TGGA--GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGT-GAA 349990
|| ||| | ||| ||||| ||||| | | ||||| || | || ||
Sbjct 15970710 GAAAAGATGTCAGGAAGGATAA---CAGAGCTGTACAGAAACTAAG-ACGGGAAGTAGAG 15970765
Query 349991 CGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCT 350050
|| ||||| || | ||||| |||| | |||||||| || || || |
Sbjct 15970766 AAAGCGAAGCGGGCCCTGTCATCCCAGCACCAAGCTAGAATTGAAATAGAATCCTTTTTT 15970825
Query 350051 GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGAT 350110
|| || | ||||||| | | |||| ||||| ||||||||| | |||||||
Sbjct 15970826 GAAGGAGAGGATTTCTCTGAGACGCTTACTCGTGCCAAATTTGAAGAACTGAATATGGAT 15970885
Query 350111 CTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAA 350170
|| || | | || ||| | ||||| | ||||| | |||| | | | ||
Sbjct 15970886 CTGTTCCGTTCTACGATGAAGCCTGTTCAGAAAGTTCTGGAAGACTCTGACCTAAAGAAG 15970945
Query 350171 AATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAG 350230
| | |||||||| | ||| | |||||||||||||| || || || ||| | |||||
Sbjct 15970946 TCTGATATTGATGAGATTGTTCTTGTTGGTGGTTCTACTCGCATCCCCAAAATACAACAA 15971005
Query 350231 TTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCT 350290
| | ||||| || ||||| ||||| |||||| | |||||||||||||| |||
Sbjct 15971006 CTTGTTAAAGAGTTCTTCAATGGGAAAGAGCCTTCTCGTGGCATTAATCCAGATGAGGCT 15971065
Query 350291 GTTGCATATGGTGCTGCTGTTCAGGC 350316
|| || |||||||| |||||||||||
Sbjct 15971066 GTAGCCTATGGTGCAGCTGTTCAGGC 15971091
Score = 288 bits (318), Expect = 3e-72
Identities = 949/1460 (65%), Gaps = 33/1460 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || |||||| | || || || |||||||| || | ||| | || |||
Sbjct 52954747 GCCATCGGCATCGATCTGGGCACCACGTATTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 52954688
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| || || || || ||| | || || || || || || || |||
Sbjct 52954687 GTGGAGATCATTGCCAACGACCAGGGGAACCGCACCACACCCAGCTATGTGGCCTTCACC 52954628
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || ||||| | || || ||| |||| || || |||| || || || | ||
Sbjct 52954627 GATACAGAGCGCCTCATCGGGGATGCTGCCAAGAACCAAGTGGCAATGAACCCCACCAAC 52954568
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435
|| | |||||||| ||||| || || || | | | | |||| | ||| ||
Sbjct 52954567 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACC---CCACAGTGCAG 52954511
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
|| || | || || | || || ||| || || || |||| || || | |
Sbjct 52954510 TCGGACATGAAGCACTGGCCCTTCCGTGTGGTG---AACGAGGGTGGCAAGCCCAAGGTG 52954454
Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
|||| || || || ||||| | || || || || || || || || || |||||
Sbjct 52954453 CAGGTGGAGTACAAGGGTGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCTATGGT 52954395
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| || |||||||| |||||||| || ||| | || ||| ||| |||||||
Sbjct 52954394 GCTCACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGAAAAAAGGTACAGAATGCTGT 52954335
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
||| || || || || || || || || ||||||| || || |||||||||||||
Sbjct 52954334 TATCACAGTGCCCGCTTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCAC 52954275
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
||| | || | || || | | || || ||||| ||||| || || || ||||| ||
Sbjct 52954274 CATCACTGGCCTTAACGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATTGCCTA 52954215
Query 349735 TGGGCTTGATAAAATGAGTGACC------AAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788
||| | ||||| | || || ||| || ||| | || || ||||| || ||
Sbjct 52954214 TGGCTTGGATAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGG 52954155
Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848
|| || ||||||||||| || | || || |||| || || || ||||| || ||| |
Sbjct 52954154 AGGGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAATC 52954095
Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908
|| || ||||| || || || ||||| || || ||||| || || | || |||||
Sbjct 52954094 CACAGCAGGTGACACCCACCTGGGTGGGGAGGACTTTGACAACCGAATGGTAAACCATTT 52954035
Query 349909 TGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967
||| |||| || |||||| |||| || ||| |||| | ||| ||||| ||
Sbjct 52954034 TGTAGAAGAGTTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGTGA 52953976
Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAACC 350026
| || || | || || ||||| | || |||||| | || | | ||| | || ||| ||
Sbjct 52953975 GGCGTCTGCGTACAGCTTGTGAGAGGGCGAAGCGTACTCTGAGC-TCTTCCACGCAAGCC 52953917
Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086
||||| ||||| || || ||| |||| || |||| | || || || |||||
Sbjct 52953916 AGCATTGAGATTGACTCCCTCTTTGAGGGCATTGACTTCTACACCTCCATCACTCGTGCC 52953857
Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146
|| ||||| ||| | | |||||||| | | || |||| || ||||| || |
Sbjct 52953856 CGCTTTGAGGAACTCAATGCTGATCTTTTCCGTGGTACCCTGGAGCCAGTGGAGAAGGCC 52953797
Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206
| ||||| || | || ||||| | || | || | || || || ||
Sbjct 52953796 CTGCGTGATGCCAAGCTTGATAAGGGCCAGATCCAGGAGATTGTGCTTGTGGGGGGCTCC 52953737
Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTC 350265
|| |||||||| || | || |||| || || || || ||||||||||| | |
Sbjct 52953736 ACTCGTATTCCTAAGATCCAGAAGTTGCTGCAAGATTTCTTCAATGGCAAAGAGCTGAAC 52953677
Query 350266 TAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTT 350325
||| | || |||||||||||||||||||| |||||||| ||||| || ||| |||| |
Sbjct 52953676 AAGAGC-ATCAATCCAGATGAAGCTGTTGCTTATGGTGCCGCTGTGCAAGCAGCTATCCT 52953618
Query 350326 ATCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCACT 350382
||| | ||| ||| ||| || | ||||| | || | ||||| || || ||
Sbjct 52953617 CATGGGAGACAAG---TCTGAAAATGTGCAAGATCTGCTCCTGTTGGATGTCACCCCCCT 52953561
Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442
|| || || | || || |||||| ||| ||||||| ||| || | || | ||
Sbjct 52953560 GTCCCTGGGCATCGAGACAGCTGGTGGAGTGATGACTGCTCTCATCAAGCGTAACACCAC 52953501
Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502
| || || ||| | | || || || | || | |||| || ||| ||| || |
Sbjct 52953500 CATTCCCACCAAACAAACACAGACCTTCACCACCTACTCAGACAACCAG--AGCAGTGTC 52953443
Query 350503 --AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAA 350560
| || |||| |||||| ||||||||| ||||| || || || || || |
Sbjct 52953442 CTCGTCCAGGTATATGAAGGAGAACGTGCTATGACTAAGGACAACAACTTGCTGGGCAAG 52953383
Query 350561 TTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTC 350620
||| ||||| | || || ||| || | |||||||||||||| || ||| ||||
Sbjct 52953382 TTTGACCTAACAGGCATCCCCCCAGCACCCCGTGGAGTTCCTCAGATCGAGGTCACTTTT 52953323
Query 350621 GATATTGATTCAAATGGTAT 350640
|| || ||| | ||||||||
Sbjct 52953322 GACATAGATGCTAATGGTAT 52953303
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| ||||||||||||||||| || ||||| |||||||| ||||| |||||| |
Sbjct 15971093 CAGCCTGAACAGCTGCACCATAGGCTACAGCCTCATCTGGATTAATGCCACGAGAAGGCT 15971034
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
|||| ||||| || || ||| || | |||||| ||||| || || | ||| |||||||
Sbjct 15971033 CTTTCCCATTGAAGAACTCTTTAACAAGTTGTTGTATTTTGGGGATGCGAGTAGAACCAC 15970974
Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429
| || | || | ||||| |||| | || | | | || |||| | |||||| |
Sbjct 15970973 CAACAAGAACAATCTCATCAATATCAGACTTCTTTAGGTCAGAGTCTTCCAGAACTTTCT 15970914
Query 183430 CAACAGGGTCCATAGT 183445
|||||| | ||| ||
Sbjct 15970913 GAACAGGCTTCATCGT 15970898
>seq7078
Length=6280547
Score = 203 bits (224), Expect = 1e-46
Identities = 374/541 (69%), Gaps = 12/541 (2%)
Strand=Plus/Plus
Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829
||||||||||||| | || ||||| || |||||||| ||| | || || ||||||| |
Sbjct 3075462 TTCTTATTTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATTGAAGATG 3075521
Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889
| || ||||| || ||| | ||||| ||||| || ||| | ||||||||||||||||| |
Sbjct 3075522 GCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCATTTGGGTGGAGAAGATTTTGACA 3075581
Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGA 349948
| || | || || || || ||||| ||||| ||||| || | || || |
Sbjct 3075582 ACCGCATGGTCAACCACTTCATTGCTGAATTCAAGCG-CAAGCACAAGAAAGACATCAGT 3075640
Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008
|| || |||||| | |||||||| | ||||| ||||||||||| |||||| || |
Sbjct 3075641 GAGAACAAGAGAGCAGTTCGTCGCCTTCGTACTGCATGTGAACGTGCAAAGCGTACCCTG 3075700
Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068
||||| | || ||| || ||||||||| |||||||| ||| || | || ||||
Sbjct 3075701 TCATCAAGCACACAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGTATTGACTTCTAC 3075760
Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126
|||| || || | ||||| || ||||| || ||| || || || | | ||
Sbjct 3075761 ACATCGATCACCAGAGCTCGCTTCGAAGA--GCTGAATGCTGACCTGTTCCGTGGCACCC 3075818
Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186
||||||||||||| || | | ||||| || | ||| ||||| ||||
Sbjct 3075819 TGGATCCTGTGGAGAAGGCCCTGCGGGATGCCAAGCTAGACAAGTCACAGATCCATGACA 3075878
Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246
| || | ||||| || ||||| || || ||||| |||| | | || || || |
Sbjct 3075879 TTGTGCTGGTTGGGGGGTCTACCCGCATCCCAAAGATTCAGAAACTGCTGCAAGACTTCT 3075938
Query 350247 TTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303
| || |||||||| || | ||| | || ||||| ||||||||||| || |||||||
Sbjct 3075939 TCAACGGCAAAGA--GTTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGCTTATGGTG 3075995
Query 350304 C 350304
|
Sbjct 3075996 C 3075996
Score = 159 bits (176), Expect = 1e-33
Identities = 359/533 (67%), Gaps = 6/533 (1%)
Strand=Plus/Minus
Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320
|||||||||| || ||||||||||| || || || | | | | || |||||||| ||
Sbjct 3075998 CTGCACCATAAGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAACTCTTTGCCGTTG 3075940
Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380
|| || ||| |||| || ||||| ||||| || | || || || || || | ||
Sbjct 3075939 AAGAAGTCTTGCAGCAGTTTCTGAATCTTTGGGATGCGGGTAGACCCCCCAACCAGCACA 3075880
Query 183381 ACTTCATCGATATT--ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438
| |||| ||| | |||| | ||| ||| | ||| | | || || ||||| |
Sbjct 3075879 ATGTCATGGATCTGTGACTTGT-CTAGCTTG-GCATCCCGCAGGGCCTTCTCCACAGGAT 3075822
Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498
||| || | || | || | | |||||| || | ||||| || | ||||
Sbjct 3075821 CCAGGGTGCCACGGAACAGGTCAGCATTCAGCTCTTCGAAGCGAGCTCTGGTGATCGATG 3075762
Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558
| ||||||||||| | ||| | ||||| |||||||| | |||||| |||||
Sbjct 3075761 TGTAGAAGTCAATACCCTCATAGAGAGAATCGATTTCAATACTGGCTTGTGTGCTTGATG 3075702
Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTAT 183618
| | || | || || ||||||||||| || | || ||||| | || ||| || |
Sbjct 3075701 ACAGGGTACGCTTTGCACGTTCACATGCAGTACGAAGGCGACGAACTGCTCTCTTGTTCT 3075642
Query 183619 CTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTG 183678
| | || |||| || || || | || ||||||| ||| || || | | | |
Sbjct 3075641 CACTGATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGT 3075582
Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738
| ||||||||||| ||||| ||||| || || || ||||| | ||| || ||||| || |
Sbjct 3075581 TGTCAAAATCTTCTCCACCCAAATGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGC 3075522
Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791
| ||||||||| | | |||||| |||||||| || ||||| || | ||||||
Sbjct 3075521 CATCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAA 3075469
Score = 120 bits (132), Expect = 9e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657
|| |||||| ||||||| | |||||||||||||||||||| || ||||||| ||
Sbjct 3075186 ACTGTAACTAATGCTGTAGTCACTGTACCAGCCTATTTTAACGACTCCCAGCGACAGGCC 3075245
Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717
|||||||||||||| | |||||| ||| | ||||| || |||| || ||||| || ||
Sbjct 3075246 ACAAAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACA 3075305
Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAA 349746
||||| || || || || || || |||||
Sbjct 3075306 GCTGCTGCTATAGCCTACGGTCTGGATAA 3075334
>seq6642
Length=9979828
Score = 158 bits (174), Expect = 4e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || ||||| || || || || || ||||| | || |||||||||
Sbjct 6586388 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 6586329
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| | | ||||||||||||||||| ||||||||||||
Sbjct 6586328 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCTTTATCC 6586269
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| |||||||| || || || | |||
Sbjct 6586268 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCAACCTCGAGGGTGATGGTC 6586209
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 6586208 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6586177
Score = 140 bits (154), Expect = 1e-27
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || ||||| || || || || || ||||| | || ||||| |||
Sbjct 6586844 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 6586785
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || |||||||| || || | ||||||||||||||||| |||||||| |||
Sbjct 6586784 TCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGATCAGGAGGAATGCCTTCTTTGTCC 6586725
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 6586724 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 6586665
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || || || ||||||||
Sbjct 6586664 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 6586633
Score = 134 bits (148), Expect = 4e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || |||||||| || || || || ||||| | || ||||| |||
Sbjct 6586616 AGCACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 6586557
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| | | |||||||| |||||||| |||||||| ||
Sbjct 6586556 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 6586497
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 6586496 TGGATCTTGGCCTTCACATTTTCAATTGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 6586437
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | ||||| || || ||||||||
Sbjct 6586436 TTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 6586405
Score = 131 bits (144), Expect = 5e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || ||||| || || || || || ||||| | || ||||| |||
Sbjct 6586160 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 6586101
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| | | |||||||| |||||||| ||||| || ||
Sbjct 6586100 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCT 6586041
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 6586040 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 6585981
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 6585980 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6585949
>seq6387
Length=12762846
Score = 116 bits (128), Expect = 1e-20
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || ||||| || || || || || || || | || |||||||||
Sbjct 4540395 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGCCCATCT 4540336
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | |||||||| || ||||| || || || |||
Sbjct 4540335 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 4540276
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || ||||| | ||| || || || || || || | |||
Sbjct 4540275 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 4540216
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | || || ||||| ||||||||
Sbjct 4540215 TTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 4540184
Score = 107 bits (118), Expect = 6e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || || || || || ||||| || || || || || ||||| | || || ||||||
Sbjct 4540623 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 4540564
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | || ||||| || ||||| || || || |||
Sbjct 4540563 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGGGGAATGCCCTCCTTGTCC 4540504
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || ||||| | || ||||| || || || || | |||
Sbjct 4540503 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTC 4540444
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | || || ||||| ||||||||
Sbjct 4540443 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4540412
>seq6492
Length=10956400
Score = 113 bits (124), Expect = 1e-19
Identities = 129/173 (75%), Gaps = 3/173 (2%)
Strand=Plus/Minus
Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774
|||||||| ||||||||||| || | || || ||| || ||||| || || |||
Sbjct 10079449 ACTGCTGCTGCAATTGCATACGGATTGGACAA---GAGAGAGGGTGAAAAGAACATCCTT 10079393
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
| ||||| | |||||||| ||||||||||| || || || ||| |||| | ||| |
Sbjct 10079392 GTATTTGACCTGGGTGGTGGAACTTTTGATGTCTCCCTCCTGACAATTGACAACGGAGTC 10079333
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887
||||||||| || || |||||| ||||| || ||||||||||| |||||
Sbjct 10079332 TTTGAAGTTGTGGCTACAAATGGTGACACACACCTGGGTGGAGAAGACTTTGA 10079280
Score = 109 bits (120), Expect = 2e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
|||||||| | ||| | |||||||||||||| || || || ||| | ||||| | |
Sbjct 10078672 ATTGATGAGATTGTTCTTGTTGGTGGTTCTACTCGCATCCCCAAAATACAACAACTTGTT 10078613
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296
||||| || ||||| ||||| |||||| | |||||||||||||| ||||| ||
Sbjct 10078612 AAAGAGTTCTTCAATGGGAAAGAGCCTTCTCGTGGCATTAATCCAGATGAGGCTGTAGCC 10078553
Query 350297 TATGGTGCTGCTGTTCAGGC 350316
|||||||| |||||||||||
Sbjct 10078552 TATGGTGCAGCTGTTCAGGC 10078533
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| ||||||||||||||||| || ||||| |||||||| ||||| |||||| |
Sbjct 10078531 CAGCCTGAACAGCTGCACCATAGGCTACAGCCTCATCTGGATTAATGCCACGAGAAGGCT 10078590
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
|||| ||||| || || ||| || | |||||| ||||| || || | ||| |||||||
Sbjct 10078591 CTTTCCCATTGAAGAACTCTTTAACAAGTTGTTGTATTTTGGGGATGCGAGTAGAACCAC 10078650
Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429
| || | || | ||||| |||| | || | | | || |||| | |||||| |
Sbjct 10078651 CAACAAGAACAATCTCATCAATATCAGACTTCTTTAGGTCAGAGTCTTCCAGAACTTTCT 10078710
Query 183430 CAACAGGGTCCATAGT 183445
|||||| | ||| ||
Sbjct 10078711 GAACAGGCTTCATCGT 10078726
Score = 96.9 bits (106), Expect = 1e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660
|| ||| |||||||| ||||||| |||||||| || |||||||| |||||| || |||
Sbjct 10079651 GTTACTCATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCCACA 10079592
Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713
||||||||||| | ||||| ||||| || || | | || |||||||| ||
Sbjct 10079591 AAAGATGCTGGTACTATTGCTGGGTTGAACGTGATGCGCATTATTAATGAGCC 10079539
>seq2929
Length=111302122
Score = 84.2 bits (92), Expect = 7e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607
|||| || ||||| || ||||| | || || |||||||| || || || |||||||| |
Sbjct 48326 CTTTCTGGATATTGTAGTCAGACAGCGTGCGGCCATCTTCCAGCTGCTTCCCAGCAAAAA 48267
Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636
| || || |||||||||||||||||||||
Sbjct 48266 TCAGTCGCTGCTGATCAGGAGGAATTCCT 48238
Score = 84.2 bits (92), Expect = 7e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781
|||||||||| || | ||||| ||||| || | |||||||||||| ||||| || |
Sbjct 96934804 CCTCATCTCTGCTGATGAGCTCATTAGAAAAAGTGAGTCCAGGCATTAAGCCTCTTTTCT 96934745
Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841
||| |||||| |||| ||||| || ||||| || || ||||| || ||||| |
Sbjct 96934744 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATG 96934685
Query 223842 CTACTA 223847
||||||
Sbjct 96934684 CTACTA 96934679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514798651725425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |