Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq2929 82.4 9e-11 >seq2929 Length=111302122 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/125 (75%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 32826 GGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTAT 32885 |||||| | ||||||||||| ||||| ||| | ||||| |||||||| ||||| | ||| Sbjct 79576960 GGACAG-CTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTTATTATGTACATGTAT 79577018 Query 32886 TACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTA 32945 ||||||||| | || || ||| | | || ||||| ||||||||| ||| || Sbjct 79577019 TACGGATTAGCTGCCTGTGGCCCTAAAGTTCAGAAGTATCTGTGGTGGAAACGATACTTG 79577078 Query 32946 ACTAT 32950 ||||| Sbjct 79577079 ACTAT 79577083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603003804134000