Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16] 23,475 sequences; 1,230,258,557 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq6642 86.0 4e-12 >seq6642 Length=9979828 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| || ||||| |||| || ||||| || || || |||| Sbjct 6586498 GACAAAGAAGGCATTCCTCCCGATCAGCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAA 6586557 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||| | |||| || ||||||||||| |||||| ||| ||||| |||| || Sbjct 6586558 GACGGGCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCCACCCTGCATCTGGTGCTG 6586617 Query 28003 CGTTTGCGTGGCGGC 28017 ||| || | || ||| Sbjct 6586618 CGTCTGAGGGGAGGC 6586632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355760587211325