Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq44559 95.1 8e-15
>seq44559
Length=13795
Score = 95.1 bits (104), Expect = 8e-15
Identities = 110/148 (74%), Gaps = 8/148 (5%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
||||| |||||||| |||||||| ||||| |||||||| ||||| | || || || |||
Sbjct 11862 TATTCGGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 11921
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTA----GATCCATTTGCATCCCAAAT 97517
|| | |||||| ||||||| | ||| || |||||||| |||||||||||
Sbjct 11922 CTGGTGCTGAAACCCTGCTTATCCA----GGAACTCACGTGATCCATTAGCATCCCAAAT 11977
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545
| |||||| ||| | |||||||||
Sbjct 11978 CTTCACACCCTTTGCAGAGAGCTCTTTG 12005
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||| ||||| || |||||||| |||
Sbjct 8553 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 8612
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
||||||||||| | || || ||||| | || || || | | |||| |||||
Sbjct 8613 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGGACATAG 8672
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296
||||| | | |||| || || ||||| ||||| | || ||||| || ||| | |
Sbjct 8673 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATCAGAGAAATATCTAGGA-ATTGC-A 8730
Query 97297 GCACA 97301
|||||
Sbjct 8731 GCACA 8735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346522675606670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |