Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq32411 125 7e-24 seq8137 102 8e-17 >seq32411 Length=23632 Score = 125 bits (138), Expect = 7e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| || |||||||||||||| || | ||| ||||| ||||||| ||| || Sbjct 20698 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 20757 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||| || | ||||| || || |||||||| || || ||||| |||||||| ||| Sbjct 20758 AGCCAAAAAATTGATGCAAAAGAGCCTGAAAAGAAGATCCCTTCCACTGCTGCAAAAGCT 20817 Query 11774 ACTACTCTTTCTCC 11787 ||||| | |||||| Sbjct 20818 ACTACGCGTTCTCC 20831 >seq8137 Length=98436 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || |||||||| || || || | ||| ||||||| || | || || Sbjct 11191 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 11132 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||||||||||||||| ||||| |||||||| || || || || || ||||| || Sbjct 11131 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 11072 Query 11774 ACTACTCTTTCTCC 11787 || ||||| || || Sbjct 11071 ACCACTCTCTCACC 11058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468162683038640