Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq30936 102 1e-17
>seq30936
Length=12900
Score = 102 bits (112), Expect = 1e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531
|| ||| ||||||| || ||||| ||||||||||| || || || || ||||| ||||
Sbjct 11171 GGCATCCCCAAGCCGGCCATCCGCCGTCTGGCTCGGCGCGGCGGCGTGAAGCGCATCTCG 11230
Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591
|| | |||| || |||| || | || ||||| ||||||| ||| ||| ||||
Sbjct 11231 GGCCTCATCTACGAGGAGACGCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGC 11290
Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651
|| || || || || ||||||||||| | ||||| || || ||||||| | |||
Sbjct 11291 GACGCCGTCACTTACACGGAGCACGCTAAGAGGAAGACGGTTACAGCCATGGACGTGGTC 11350
Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| || | || || || || || | | ||||| || ||
Sbjct 11351 TACGCCCTCAAGCGCCAGGGACGCACCCTCTATGGCTTCGG 11391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79018667483883
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |