Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq30936 102 1e-17 >seq30936 Length=12900 Score = 102 bits (112), Expect = 1e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||| ||||||| || ||||| ||||||||||| || || || || ||||| |||| Sbjct 11171 GGCATCCCCAAGCCGGCCATCCGCCGTCTGGCTCGGCGCGGCGGCGTGAAGCGCATCTCG 11230 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | |||| || |||| || | || ||||| ||||||| ||| ||| |||| Sbjct 11231 GGCCTCATCTACGAGGAGACGCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGC 11290 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 || || || || || ||||||||||| | ||||| || || ||||||| | ||| Sbjct 11291 GACGCCGTCACTTACACGGAGCACGCTAAGAGGAAGACGGTTACAGCCATGGACGTGGTC 11350 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || || | || || || || || | | ||||| || || Sbjct 11351 TACGCCCTCAAGCGCCAGGGACGCACCCTCTATGGCTTCGG 11391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79018667483883