Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq44559 91.5 4e-13 >seq44559 Length=13795 Score = 91.5 bits (100), Expect = 4e-13 Identities = 122/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | ||||| ||| || |||||||||| ||||||||||| Sbjct 12014 TACAAATGCCAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGATCACG 11955 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 11954 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTT 11897 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| || || |||||| |||||| Sbjct 11896 TATGGTTTCCAGTGGAGGCACTTTGGAGCCGAATACAAAGATATGCAC 11849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302321070651842