Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq42580 107 1e-18
seq18997 105 4e-18
>seq42580
Length=836
Score = 107 bits (118), Expect = 1e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 86 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 145
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 146 GCCCGTATTTAGCCTTA 162
>seq18997
Length=37763
Score = 105 bits (116), Expect = 4e-18
Identities = 79/93 (85%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| |||||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct 29569 AAGCCTGTTCCCTTGGCTGTGGTTTCACTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 29628
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| ||||||||| |||||||| |||||||
Sbjct 29629 TCATCCATTCATGCGCATCACTAATCAGATGAC 29661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334694795408561
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |