Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq49351 104 2e-17 >seq49351 Length=2879 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 || |||||| || || || || || | || || || || |||| || || || || | Sbjct 146 AACGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTTGAGCC 205 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| || || || ||||||||||| ||||| || || Sbjct 206 CAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGA 265 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || | || || || || ||||| ||| | || ||| |||||| | ||||| || Sbjct 266 TCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTA 325 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || ||||||||| | || || || |||| || | || ||| Sbjct 326 CAACATCCAGAAGGAATCCACCCTGCACTTGGTGCTGCGCCTGAGGGGTGGT 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419411707538515