Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq8137 93.3 8e-14
seq34904 86.0 1e-11
>seq8137
Length=98436
Score = 93.3 bits (102), Expect = 8e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| |||| |||||| | || || || ||||||||||| ||||| |||| ||
Sbjct 11058 GGTGAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 11117
Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815
| || || ||||| ||| ||| || |||||| ||||| || ||||| || |||||
Sbjct 11118 GCTATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTT 11177
Query 42816 ATCAGCAGGGACGAGG 42831
|| ||||| || ||||
Sbjct 11178 ATTAGCAGAGATGAGG 11193
>seq34904
Length=29476
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067
|| |||||| || || || ||||||||||| ||| ||||| |||| | |||||| ||
Sbjct 9102 CTTCATGAAAAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTC 9043
Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127
|||||||||||| | | || | ||| ||||||| ||| | ||||| |||||||
Sbjct 9042 TTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAG 8983
Query 245128 GTAGA 245132
|||||
Sbjct 8982 GTAGA 8978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943609332036560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |