Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq23118 214 2e-50 seq23937 196 6e-45 seq7285 93.3 5e-14 >seq23118 Length=2796 Score = 214 bits (236), Expect = 2e-50 Identities = 764/1183 (65%), Gaps = 26/1183 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || ||||| ||||| |||||||| || || | Sbjct 837 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATACGGTCAATGTCATCCTT-GC 895 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||||||| | ||| || Sbjct 896 TAAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTGCTCTTGTCCA 955 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 | ||||| || |||| |||||||| ||||| | || || | || | ||| || || Sbjct 956 CGGCACTGACGTTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCAATCTGGGGG- 1014 Query 6747 TACCCCTCGGTGCGGCTGGA--ATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || ||| ||| | || || ||||||| |||||| | || || || |||| || Sbjct 1015 -ACTCCACGGGGCGCCGGGGGGATGCCCGTTAGGTCAAATTTGCCCAGCAAGTTGTTGTC 1073 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | | | | ||||| || || || | | || | || || || Sbjct 1074 CTTTGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGACGCTACTCTGGTTGTCCGA 1133 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | |||| | || || || | ||||| || || || | | || | | Sbjct 1134 GTAGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAGC 1193 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||| | ||||| || |||| || || |||||||| || || ||||| || || Sbjct 1194 AGTCATCACTCCACCAGCTGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCAA 1253 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 ||| || || ||| || | || ||| | | ||| || ||||| || | || || Sbjct 1254 CAGATCCTGCACATTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCGCC 1313 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 ||| || || |||||||||||||| || | || || || ||||| || || || | || Sbjct 1314 GTAAGCAACAGCCTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTC 1373 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 | || || | ||| || || ||||| || || || ||||| |||| || || || | Sbjct 1374 CTGTAGCAGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACCAGCACAATCTCCTG 1433 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 | | || || | ||| | || || || | || || || || |||| Sbjct 1434 GATCTGGCCCTTGTCTAGCTTGGCATCACGCAGAGCCTTCTCCACTGGCTCCAGGGTGCC 1493 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||| | || | || ||||| || || ||||| |||||||| || ||||| || Sbjct 1494 ACGGAAGAGATCAGCATTGAGCTCCTCGAAGCGAGCACGAGTAATGGAGGTGTAGAAGTC 1553 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGT 7341 || || ||||| | || || || || ||| | | ||| ||| ||||| | || Sbjct 1554 AATACCCTCGTAGAGGGAGTCGATCTCGATGCTAGCTTG---CGTGGAAGAGCTGAGAGT 1610 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 |||||||| | |||||| || || || | || | | || ||| ||| || | ||| Sbjct 1611 GCGCTTTGCCCTCTCACAAGCTGTACGCAGTCGCCTCACTGCTCGCTTGTTGCCAGCAAT 1670 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTT-CAGAGAAGTGTCGA--AGGAGTCTCGAATC 7458 || ||| || ||||| || || |||| || | || || | | | | | || Sbjct 1671 GTCACGCTTGTGCTTACGCTTGAATTCTTCCACAAAATGGTTCACCATGCGGTT---GTC 1727 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 || || || ||||||| || || || || || || | || || |||||||| || | Sbjct 1728 AAAGTCCTCCCCACCCAGATGGGTGTCACCAGCTGTAGACTTCACCTCAAAGATGCCATC 1787 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||||| | | | || ||||| || || || || |||| |||||| ||||| ||||| Sbjct 1788 CTCAATGGTAAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATGAGCACGTT 1847 Query 7579 CGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | || | | | ||||| || | || || || ||||| || || || || Sbjct 1848 CTTCTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGG 1907 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||||| |||||||| | ||| || ||||||| || || | |||||||| || || | Sbjct 1908 CTCATTGATAATACGCATCACA-TTAAGGCCAGTGATGGTGCCAGCATCTTTGGTGGCCT 1966 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 | || || || || || ||||| || || || || | ||| || Sbjct 1967 GGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGC 2009 >seq23937 Length=27876 Score = 196 bits (216), Expect = 6e-45 Identities = 371/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||||||||| || || || Sbjct 25888 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGTTCTTTGCCATTGAAG 25947 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 25948 AAGTCCTGCAGCAGTTTCTGAATCTTTGGGATGCGAGTAGACCCACCAACCAGCACGATG 26007 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| || | || | || || || | ||||| ||||| |||| Sbjct 26008 TCATGGATCTGCGATTTGTCAAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 26067 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| || ||||| || || | |||||||||||| ||| Sbjct 26068 GTGCCACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 26127 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | | ||||| | Sbjct 26128 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGAAGACAGA 26187 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| | Sbjct 26188 GTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCACTG 26247 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || || ||||| || || | | | | Sbjct 26248 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---G 26304 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 26305 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 26364 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || |||||||| || || || Sbjct 26365 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACA 26424 Query 7577 TTC 7579 ||| Sbjct 26425 TTC 26427 >seq7285 Length=7271 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT---TGGTTC 7993 ||||| || ||||| |||||||| || ||||| | |||||| || || |||||| Sbjct 7052 CCGATGAGCCGCTTGGCATCAAACACGGTGTTCTCGGGGTT---GGACGTAAGCTGGTTC 7108 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||||||||| | || || | ||| ||||| ||||| || || || Sbjct 7109 TTGGCGGCGTCCCCGATCAAGCGCTCCCCCTCGGGCGTGAACGCCACGTAGGACGGCGTG 7168 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 | || ||||| |||||||| || || ||||| |||||| | || | ||||||| ||| Sbjct 7169 ATGCGGTTCCCCTGGTCGTTGGCGATGATTTCCACGCGGCCATTCTTGAAGACGCCCACG 7228 Query 8114 C 8114 | Sbjct 7229 C 7229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634641913798040