Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq32411 84.2 3e-11
seq8137 82.4 9e-11
>seq32411
Length=23632
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493
|| ||| ||||||| |||||||| ||||||||||| || || || |||||||| |||
Sbjct 19122 AAAGCGGAGAATCCTTTTGACTTCATGGAAAACATCTCTCTGGAAGGCAAGACCAATTTC 19063
Query 65494 TTTGAGAAGCGAGTTGGGGACTAT 65517
|||||||||||||| || || |||
Sbjct 19062 TTTGAGAAGCGAGTAGGTGAATAT 19039
>seq8137
Length=98436
Score = 82.4 bits (90), Expect = 9e-11
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145
|||| ||||| || || || |||||||| || || || || ||| ||||| | ||||
Sbjct 11071 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 11129
Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205
|||||||| |||| || ||||| || || ||||| |||||||||||| | |||||
Sbjct 11130 CTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAGAT 11189
Query 65206 GAGG 65209
||||
Sbjct 11190 GAGG 11193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596108518813280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |