Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq33410 228 1e-53
seq2751 201 2e-45
seq28407 172 9e-37
seq15108 125 1e-22
seq25804 96.9 5e-14
>seq33410
Length=1362
Score = 228 bits (252), Expect = 1e-53
Identities = 204/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 838 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 897
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 898 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 957
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| ||||||||||| || |||||||
Sbjct 958 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 1017
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 1018 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 1077
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 1078 ACACGTAGATCGAGTA 1093
>seq2751
Length=30050
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| |||||||||||||||||| ||||||| || || | |
Sbjct 14821 TGTACTTGGTGACGGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCCAGCTCTCCTGGGA 14880
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||| ||||| || | | ||| ||| |||||||||
Sbjct 14881 GCAGCAGGCGCACGGCTGTCTGAATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAAT 14940
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||||| ||| || ||||||| || | |||||||||||||| |||||||
Sbjct 14941 GGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCAAAGATGTCGTTGACAAAGGAGTTCA 15000
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||||||||| |||||||| ||||||||||
Sbjct 15001 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 15060
Query 1485710 AAAC 1485713
| ||
Sbjct 15061 AGAC 15064
>seq28407
Length=1888
Score = 172 bits (190), Expect = 9e-37
Identities = 193/257 (75%), Gaps = 17/257 (7%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 533 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 474
Query 1485530 TGATCAGGCGCACGGC-GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG 1485588
| || ||| ||| | ||||||||||| || | | ||| || ||
Sbjct 473 GCAGCA-GCGGACGTCTCGTCTGGATCTCCCGCGAGGGGAT-GTATT------------- 429
Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|||||||||| ||||||| ||||||| |||| ||||||||||| || ||||||
Sbjct 428 -GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTC 370
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||
Sbjct 369 ATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTG 310
Query 1485709 TAAACAAAGGACGAGTA 1485725
|| || || ||||||
Sbjct 309 TACACGTAGATCGAGTA 293
>seq15108
Length=1589
Score = 125 bits (138), Expect = 1e-22
Identities = 123/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626
||| ||| ||||||||| | |||||||||| ||||||| ||||||| ||||
Sbjct 1255 GATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAA 1196
Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686
||||||||||| || ||||||||||| ||| | ||| ||||||||| ||||||
Sbjct 1195 GATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGG 1136
Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTA 1485725
|||||||||||| ||||||||||| || || ||||||
Sbjct 1135 GTGCACCTGCTTCAGCACCTTGTACACGTAGATCGAGTA 1097
>seq25804
Length=1697
Score = 96.9 bits (106), Expect = 5e-14
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 1128 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 1187
Query 1485530 TGATCAGGCGCACGGCGGTCTGG 1485552
| ||| ||||| || ||||||
Sbjct 1188 GCAGCAGCCGCACCGCCGTCTGG 1210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7909669154518809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |