Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq8137 87.8 4e-12
seq32411 86.0 1e-11
>seq8137
Length=98436
Score = 87.8 bits (96), Expect = 4e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917
||| | || || |||||| |||||||| || |||||||| ||| | || ||||||
Sbjct 11064 AGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATA 11123
Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977
|||||||| |||||| | || ||||||||||||| | || |||||| || | ||
Sbjct 11124 TTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGC 11183
Query 131978 AGAGATGA 131985
||||||||
Sbjct 11184 AGAGATGA 11191
>seq32411
Length=23632
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923
||||||||||| || ||||| || ||||||||||| |||| | || ||||||
Sbjct 20819 GTAGCTTTTGCAGCAGTGGAAGGGATCTTCTTTTCAGGCTCTTTTGCATCAATTTTTTGG 20760
Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983
|| ||||| | ||||| |||||||||||| | || || ||| || ||||| ||||||
Sbjct 20759 CTGAAGAAAAGAGGATTAATGCCTGGACTCACTTTTTCTAATGAACTCATCAGTAGAGAT 20700
Query 131984 GA 131985
||
Sbjct 20699 GA 20698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1185872595402591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |