Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq34904 86.0 8e-12
seq8137 82.4 1e-10
>seq34904
Length=29476
Score = 86.0 bits (94), Expect = 8e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337
|||||||| | ||||||||||| | ||| | || || |||||||| |||| ||
Sbjct 10498 GTGTACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGA 10439
Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397
|| |||||| |||||| | || ||||| |||||||| || || || ||||| |||||
Sbjct 10438 TTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCTGTCTGA 10379
Query 111398 GATTTGAGAATAGCCTTCCA 111417
|||| | ||||| | |||
Sbjct 10378 GATTCAATGATAGCGTACCA 10359
>seq8137
Length=98436
Score = 82.4 bits (90), Expect = 1e-10
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
||||||||| | |||||||||||| ||||| || || ||||| || |||| |||||
Sbjct 11193 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 11134
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | ||||| ||| || || || || |||||||| || || || |||||
Sbjct 11133 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAG 11075
Query 122797 GCAA 122800
||||
Sbjct 11074 GCAA 11071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627546601917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |