Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq10683 91.5 2e-13
seq8137 89.7 6e-13
>seq10683
Length=160435
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| || |||| ||| ||||||||||| |||||| ||| | ||||| || ||
Sbjct 115445 GTGAAAATATAGCGAGGGCTGGCAGCATCCTTTCCACCATGAAGCCTGGTACCAAACTGA 115504
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | | || || | ||||| ||| |||||||| |||||||||||||||
Sbjct 115505 CCAATAGGTTGTAGCAGATTAACATTGTTACTGCCAACAAAGTTCTGAGCCAAGTTGACA 115564
Query 117425 ATCGT 117429
|| ||
Sbjct 115565 ATAGT 115569
>seq8137
Length=98436
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| || || | || |||||||| || || | |||||||
Sbjct 11191 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 11132
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||||| || ||| |||||||| |||||||||||||| || ||||||||
Sbjct 11131 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 11072
Query 74892 AC 74893
||
Sbjct 11071 AC 11070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546793063593800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |