Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq38230 132 6e-26
>seq38230
Length=46016
Score = 132 bits (146), Expect = 6e-26
Identities = 126/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729
|| || |||| |||| | |||||||||| || |||||| | ||||| | ||||||||
Sbjct 26992 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 27051
Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789
|||| ||||||||||||||| |||| || | || || || |||||||| ||||||||
Sbjct 27052 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 27111
Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
|| || | ||||| || ||||| ||| ||||||| |||||
Sbjct 27112 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 27152
Score = 82.4 bits (90), Expect = 9e-11
Identities = 100/135 (74%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 32826 GGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTAT 32885
|||||| | ||||||||||| ||||| ||| | ||||| |||||||| ||||| | |||
Sbjct 29311 GGACAG-CTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTTATTATGTACATGTAT 29369
Query 32886 TACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTA 32945
|| |||||| | || || ||| || | ||||| || ||||||||| ||| ||
Sbjct 29370 TATGGATTAGCTGCCTGTGGCCCTAAATTTCAGAAATACCTGTGGTGGAAACGATACTTG 29429
Query 32946 ACTATCATACAATTG 32960
|| || | ||||||
Sbjct 29430 ACCATATTGCAATTG 29444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602714609099440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |