Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13]
61,831 sequences; 1,129,694,867 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq44559 98.7 8e-16
seq33477 91.5 1e-13
>seq44559
Length=13795
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/162 (75%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075
|| |||||||||||||| || || || ||||||| || ||||| || || ||||| |||
Sbjct 11874 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTGCT-GAA 11932
Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| ||| |||| || || | || || || || ||||| ||||| || ||||| |
Sbjct 11933 ACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACCCTTTGC 11992
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 30177
||||||||||||| ||||| || || || || || |||||
Sbjct 11993 AGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAG 12032
>seq33477
Length=7394
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| |||||||||||||| |||| || | |||||| | | ||| | |||||| || ||
Sbjct 4392 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 4451
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| || ||| |||||||||||| | ||||| ||||||
Sbjct 4452 ATGGAGAACCAGGTTTTTTTACCCATTATCAGGGCATTCTGTTTACCT 4499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405857129501266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |