Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq44559 105 5e-18 >seq44559 Length=13795 Score = 105 bits (116), Expect = 5e-18 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| || ||||| || |||||||| ||||| || || || ||||||| || Sbjct 11852 CATATCTTTGTATTCGGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 11911 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| || ||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 11912 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 11970 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| ||||| || ||||| | ||||||||||||| ||||| || || || || || | Sbjct 11971 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 12028 Query 27668 ACAG 27671 |||| Sbjct 12029 ACAG 12032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369228752191361