Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq9 111 1e-19 >seq9 Length=14393062 Score = 111 bits (122), Expect = 1e-19 Identities = 138/184 (75%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| |||| |||||||||||| || ||||| ||||| | || Sbjct 1410710 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATC 1410769 Query 25833 TCCATCTTCCCT-GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || || ||||| ||| ||| ||| |||| || || | || ||||| || | Sbjct 1410770 ACCCTCCTCTCTGGTGCTGAAA-CCCTGCTTGTCCAGGAACTCACGCGACCCATTAGCAT 1410828 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||||| ||||| || || || || || | Sbjct 1410829 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 1410886 Query 25952 ACAG 25955 |||| Sbjct 1410887 ACAG 1410890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340024682713947