Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq66 93.3 4e-14 >seq66 Length=4205697 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| |||||| || || || ||||| |||| || || ||||||| | || || ||| Sbjct 1637287 GGAAAAATGCAGATCTTCGTTAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAG 1637346 Query 25053 TCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109 | |||||| || ||| | || |||| || | || ||||| || || ||||| Sbjct 1637347 CCCAGTGACACCATTGAG--AATGTCAAAGCCAAGATCCAA-GACAAGGAGGGCATTCCC 1637403 Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169 |||||||| ||| || | || || || || || || | ||||||| || || || Sbjct 1637404 CCTGACCAGCAGAGGCTGATCTTCGCAGGGAAGCAGCTGGAAGATGGCCGTACCCTGTCT 1637463 Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || ||||||||||| || || || ||||| Sbjct 1637464 GACTACAACATCCAGAAAGAATCCACTCTGCACTTGGTGCT 1637504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433184145801785