Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq158 104 2e-17 >seq158 Length=1624924 Score = 104 bits (114), Expect = 2e-17 Identities = 88/106 (83%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 95105 CCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCT 95164 |||||||||||||||||||||| || |||||||| |||||||||||||| |||| |||| Sbjct 182239 CCCCCATGCCCACGGCCTCCACTGCCCAGATCCTGGGCAACAACGAGTCCATCGAGCCCT 182298 Query 95165 TCACCTCCAACGTGTACAACAGGC-GGGTGCTCGCCGGGGAATTCC 95209 |||| |||| | ||| ||| || |||| ||| | ||||| |||| Sbjct 182299 ACACCAGCAACATCTAC-ACACGCAGGGTCCTCTCGGGGGAGTTCC 182343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494554752934440