Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25]
27,239 sequences; 1,065,292,181 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq158 96.9 3e-15
seq72 86.0 6e-12
>seq158
Length=1624924
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699
|||||| ||| ||||||| ||| |||||||||||||| ||| ||||| || ||||| |
Sbjct 177777 TGTACTCCACAATCTCGGTGCACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGT 177718
Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 153752
|||| || | ||||| | ||| ||| |||||||||| || ||| ||||||
Sbjct 177717 TGCTCTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCAGTCTCG 177665
>seq72
Length=3839329
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
||||||| || || |||||||||||| || ||| ||| ||| || || || || || |
Sbjct 3369163 TTGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGCCCGTCTTCCAGCTGCTTGCCAG 3369222
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| |||| || | ||| || || || || || || || ||||| ||| || || |
Sbjct 3369223 CAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCA 3369282
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
| || | |||||| | | ||| ||||| | || | || || |||||||| || |
Sbjct 3369283 CATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCT 3369342
Query 138599 TTACAAAAATCTGCATG 138615
| ||||| |||||||||
Sbjct 3369343 TCACAAAGATCTGCATG 3369359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496093428856080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |