Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq158 98.7 1e-15 >seq158 Length=1624924 Score = 98.7 bits (108), Expect = 1e-15 Identities = 101/131 (77%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGG---TGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCAC 115932 ||||| |||| |||| ||||| | ||||||||| | ||||| ||||| | | || Sbjct 182341 AACTCCCCCGAGAGGACCCTGCGTGTG---TAGATGTTGCTGGTGTAGGGCTCGATGGAC 182285 Query 115933 TCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTG 115992 || ||||| |||| ||| ||||| |||||||| ||||||||||| | ||||| |||||| Sbjct 182284 TCGTTGTTGCCCAGGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGAAATGAGGAGGCTG 182225 Query 115993 TTGCGGAGACC 116003 || | || ||| Sbjct 182224 TTCCTGACACC 182214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613298308467240