Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 253 3e-62 >seq7 Length=16983252 Score = 253 bits (280), Expect = 3e-62 Identities = 1018/1593 (64%), Gaps = 24/1593 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| ||||| || || ||||| ||||| |||||||| || || Sbjct 9602555 TTCATCCTCTGCTTTGTACTTCTCTGCTTCTTGCACCATGCGGTCAATGTCGTCCTTGCT 9602614 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | | ||||| ||||| || || || ||||| | ||||||| | ||| || | Sbjct 9602615 GAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTGCTCTTGTCCAC 9602674 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| || || |||| |||||||| ||||| | || || | || | || || || Sbjct 9602675 AGCGCTGACGTTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGAC 9602734 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||||| ||||| | || || || |||| ||||| | || || || |||||||| | Sbjct 9602735 TCCCCTGGGTGCTGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAGTTGTTATCCCT 9602794 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGTG 6866 | | | | ||||| || || || | | || || | | || || ||| Sbjct 9602795 TGTCATAGCCCTCTCACCCTCGTACACCTGCACCAGGAC-GCTGCTCTGGTTGTCTGAGT 9602853 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | |||| | || || || | || || || ||||| | | || | | | Sbjct 9602854 AGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGGATGGTGGTATTGCGCTTGATGAGAGCAG 9602913 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| | || || || |||| || ||||||||||| || || |||| || | || Sbjct 9602914 TCATCACTCCTCCAGCCGTCTCGATGCCCAGAGACAGAGGGGTGACATCCAGCAGCAGCA 9602973 Query 6987 GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 | || || || || | || ||| | | || || ||||| || | || || | Sbjct 9602974 GATCCTGCACGTTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGTACTGCAGCACCAT 9603033 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 | || || |||||||| ||||| || | || || || |||||||| || || ||||| Sbjct 9603034 AAGCCACAGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCTTTACCATTGAAGAAATCCT 9603093 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 | || | || || || ||||| || || || ||||| |||| || || || | | Sbjct 9603094 GCAGCAGCTTCTGGATCTTGGGGATGCGGGTAGAGCCACCCACCAGCACAATCTCCTGGA 9603153 Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226 | || |||| || | || || || | || || || || |||| || Sbjct 9603154 TCTGGCCCTTGTCGAGTTTGGCATCACGCAGAGCCTTCTCCACCGGCTCCAGGGTGCCAC 9603213 Query 7227 GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAA 7286 |||| | ||| | || ||||||||||| ||||| || ||||| || ||||| |||| Sbjct 9603214 GGAAAAGGTCAGCATTGAGCTCCTCAAAACGGGCACGAGTGATGGAGGTGTAGAAGTCAA 9603273 Query 7287 CGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCT 7346 ||| || | | || ||||| |||||| | | |||| | || | || |||| Sbjct 9603274 TGCCCTCAAAGAGAGAGTCAATCTCAATGCTGGCCTGTGTGGAGGAGCTGAGGGTGCGCT 9603333 Query 7347 TTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTT 7406 |||| | |||||| || || || | || | | || ||| ||| || | ||| || Sbjct 9603334 TTGCCCTCTCACAAGCTGTGCGCAGCCGCCTCACCGCTCGCTTGTTGCCAGCAATGTCAC 9603393 Query 7407 TCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTT 7466 |||||| || || || || ||||| ||||| | | | || || || | Sbjct 9603394 GCTTATGCTTGCGCTTGAATTCTTCCACAAAGTGGTTCACCATGCGGTTGTCAAAGTCCT 9603453 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 | |||||||| || || || || || || | || || ||||| || || | || ||| Sbjct 9603454 CCCCACCCAAATGGGTGTCACCAGCTGTGGACTTTACCTCAAAAATCCCATCCTCGATGG 9603513 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | | | || ||||| || || || || ||||||||||| ||||| || ||| | || Sbjct 9603514 TAAGGATGGAGACATCGAAAGTGCCCCCTCCCAGGTCAAAGATGAGGACATTCTTCTCCC 9603573 Query 7587 CGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 | | | ||||| || || || ||||||||||| || || || || || || | Sbjct 9603574 CAGCCCGGGTTCCTTTCTTGTCCAGGCCATACGCGATAGCGGCTGCAGTGGGCTCGTTGA 9603633 Query 7641 TAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 | ||||| | ||| || ||||| | || || | || || || || || || || || Sbjct 9603634 TGATACGCATCACA-TTGAGGCCTGTGATGGTGCCGGCGTCCTTGGTGGCCTGGCGCTGG 9603692 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || || || ||||| || || || || | ||| || | | || || || ||||| Sbjct 9603693 GAGTCATTGAAGTATGCTGGCACTGTGATGACAGCATTCTGCACCTTGCACCCCAGATAG 9603752 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 | || || || || ||||| ||||| || ||||| || |||||||| | || Sbjct 9603753 GCCTCAGCAATCTCCTTCATCTTGGTCAGCACCATGGAGCTGATCTCTTCTGGGAAGAAA 9603812 Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATA 7879 |||| | || || || | || || | | | |||| || || | || | Sbjct 9603813 GTTTTCATCTCCCCCTTGTACTCCACCTGCACCTTGGGCTT----GC--CTCCCTCATTC 9603866 Query 7880 ACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 ||| | | | ||| | ||||| || || ||| |||| | |||| | Sbjct 9603867 ACCACACGGAAAGGCCAGTGCTTCATGTCTGACTGCACCGTGGGGTCATCATACTTGCGG 9603926 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || || || |||||||| | ||||| |||||||||| ||| ||||| || Sbjct 9603927 CCGATGAGGCGTTTGGCATCAAAGATGGTGTTGGTGGGGTTCATTGCTACCTGGTTTTTG 9603986 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGT 8055 || || |||||||| || || || || || || ||||| || || | |||| || || Sbjct 9603987 GCAGCATCCCCGATGAGCCGCTCCGTA---TCGGTGAACGCCACATA-GCTGGGTGTGGT 9604042 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || ||||| || ||||| || || || || || | ||| || ||||||| ||||| Sbjct 9604043 GCGGTTCCCCTGATCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAAGACGCCCACGCA 9604102 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || ||||| || || | || || ||||| || Sbjct 9604103 GGAGTACGTGGTGCCCAGGTCGATGCCGATCGC 9604135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634916545220760