Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq95 95.1 1e-14 seq102 93.3 5e-14 seq24 93.3 5e-14 seq7 93.3 5e-14 seq158 89.7 6e-13 seq22 82.4 9e-11 >seq95 Length=2992975 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1212969 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 1213028 Query 136777 GGGAACAG-CTTTT 136789 || ||| ||||| Sbjct 1213029 CGGGCCAGACTTTT 1213042 >seq102 Length=2881194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1543942 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1544000 >seq24 Length=8342771 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1618181 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1618123 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1623422 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1623364 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 136719 GCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||| ||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1622194 GCTGAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1622138 >seq7 Length=16983252 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 5975840 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 5975898 >seq158 Length=1624924 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | |||||||| |||| |||| |||||||| ||||| || |||||||| Sbjct 182315 GTAGATGTTGCTGGTGTAGGGCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCAGTGGA 182256 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || ||||||||||| | ||||| || ||||| | || ||| Sbjct 182255 GGCCGTGGGCATGGGGGAAATGAGGAGGCTGTTCCTGACACC 182214 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375 ||| || ||| |||||| |||| ||| || || |||| |||| | || ||| || Sbjct 177791 CTCATCCTTGCTGGTGTACTCCACAATCTCGGTGCACAGGTTGCTGCATTTGATGGTGCC 177732 Query 110376 CAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACC 110435 || ||||| ||| || || |||||| | ||||| ||||||||||| ||||| || Sbjct 177731 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCC 177672 Query 110436 AGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 ||| || ||||| |||| || ||||| | ||| Sbjct 177671 AGTCTCGGTCTGGGACTCGATGATGGCGTACCA 177639 >seq22 Length=8423346 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||| ||||| || | ||| || |||||||| ||||| || || || |||||||||||||| Sbjct 6654850 ATATTCACCTACTCGCTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 6654909 Query 119267 AAAGTCAAAAGGATT 119281 |||||||||||||| Sbjct 6654910 GAAGTCAAAAGGATT 6654924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588775461034200