Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq66 87.8 1e-11 >seq66 Length=4205697 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| || || | | |||||| || ||||| || || || || || | || Sbjct 1637471 TTGTAGTCAGACAGGGTACGGCCATCTTCCAGCTGCTTCCCTGCGAAGATCAGCCTCTGC 1637412 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| ||||| || ||||||||||| ||||| ||||||| ||||| || ||| Sbjct 1637411 TGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTCTCAATGGTGTCA 1637352 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | |||||||| || || || || || || ||||||||||| || || Sbjct 1637351 CTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACGAAGATCTG 1637296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267010787126372