Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq535 84.2 6e-11 >seq535 Length=62056 Score = 84.2 bits (92), Expect = 6e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || | || |||||||| || |||||||| | ||| Sbjct 50238 GTCTTGACGGCCGTGTCGATGAGGCCCTCTCGGCCACCCATGGCGTGGAAGAAGAACTCG 50179 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 || || || | | ||||| |||| ||||| || || |||||| | | Sbjct 50178 GTGGGGGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTAG 50119 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| |||| || || |||| ||||||| ||||| || Sbjct 50118 TCGTCCTTGATGAAGTGCGGCAGCGTCCGGTGCTTGAAGCCAAATGGGATCCGCTTGCCC 50059 Query 302800 TCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 50058 TCCACGTTCTGCTGGCCCA 50040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471303936117543