Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq22 104 2e-17 >seq22 Length=8423346 Score = 104 bits (114), Expect = 2e-17 Identities = 130/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAAC-TGCC 21183 ||||||||||| || | || |||||||||||| | |||||| || ||| | ||| |||| Sbjct 6365760 AGCATTTGGGGACCAACGTGTGATGGCTTAGATCGGATTGTTGAGAGGT-TCAACATGCC 6365818 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG 21243 ||||| ||||| || |||||| || | |||||||||||||| || || | || ||| Sbjct 6365819 CGAGCTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAG 6365877 Query 21244 C-TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 | |||| || || || || |||| | |||| || |||||||| || ||| Sbjct 6365878 CAGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATGTCA 6365930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463387768517520